Information for 13-GVGGTGAAGAACAAAC (Motif 18)

A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T A C G T A G T C C G T A A G T C A G T C A T C G T G A C
p-value:1e-11
log p-value:-2.554e+01
Information Content per bp:1.833
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 18.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GVGGTGAAGAACAAAC--
---AAAAATAACAAACGG
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GVGGTGAAGAACAAAC-----
----ATAAGAACAAAGGACTA
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GVGGTGAAGAACAAAC-----
----AGAAGAACAAAGGACTA
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GVGGTGAAGAACAAAC---
--GTTAAAAAAAAAAATTA
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GVGGTGAAGAACAAAC----
--------AAACAAACATTC
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GVGGTGAAGAACAAAC-
-------AAAACAAAGG
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GVGGTGAAGAACAAAC---
----GGAAANTGAAACTNA
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GVGGTGAAGAACAAAC-
--------AAATAAACA
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GVGGTGAAGAACAAAC-
-----GAAACTGAAACT
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GVGGTGAAGAACAAAC-
-----GAAAMTGAAACT
 A C T G T A C G C T A G C T A G C G A T A C T G C G T A C G T A C T A G C G T A C G T A A G T C C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T