Information for 12-TCAACATCAAAGACCA (Motif 17)

A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A
Reverse Opposite:
A C G T A T C G A T C G A C G T A G T C G C A T A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G A T A C T G C T G A
p-value:1e-11
log p-value:-2.554e+01
Information Content per bp:1.893
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.4 +/- 17.0bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCAACATCAAAGACCA
---ACATCAAAGGNA-
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCAACATCAAAGACCA
-AAAGATCAAAGGAA-
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCAACATCAAAGACCA
-AAAGATCAAAGG---
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCAACATCAAAGACCA-
NNNAGATCAAAGGANNN
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCAACATCAAAGACCA-
TATAGATCAAAGGAAAA
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCAACATCAAAGACCA
---ACATCAAAGG---
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCAACATCAAAGACCA-
TATAGATCAAAGGAAAA
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCAACATCAAAGACCA
---ACWTCAAAGG---
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAACATCAAAGACCA
-AAAGATCAAAGGGTT
 A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAACATCAAAGACCA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T A G C T A G T C C G T A C G T A A G T C C G T A G C A T A G T C C G T A C G T A C G T A A C T G C G T A A T G C A T G C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A