Information for 1-TGGCGCCATCYAGTGG (Motif 1)

A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G
Reverse Opposite:
A T G C A G T C G C T A A G T C C G A T C T G A A C T G G C T A A C G T A C T G A C T G A T G C C T A G A G T C A G T C T G C A
p-value:1e-16
log p-value:-3.829e+01
Information Content per bp:1.739
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 22.7bp
Average Position of motif in Background21.7 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGGCGCCATCYAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGGCGCCATCYAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGGCGCCATCYAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGCGCCATCYAGTGG
-GCCGCCATCTTG---
 A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGCCATCYAGTGG
TTTGGCGCCAAA------
 A C G T A C G T A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGCGCCATCYAGTGG
-GCNGCCATCTTG---
 A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGGCGCCATCYAGTGG
CCTTCGGCGCCAAAAGG---
 A C G T A C G T A C G T A C G T A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGCCATCYAGTGG
NNNNTTGGCGCCGANNN----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGGCGCCATCYAGTGG
-GACCCCCCGCTGTG-
 A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGCGCCATCYAGTGG
-GGCCYCCTGCTGDGH
 A C G T C T A G T C A G A G T C A T C G A G T C A G T C G T C A C G A T T A G C A G C T C G T A A C T G C G A T A C T G A T C G
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C