Information for 1-GATAAATGGC (Motif 7)

A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C
Reverse Opposite:
A C T G G T A C A G T C C G T A A C G T A C G T A G C T C T G A A C G T G T A C
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.852
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif56.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets35.5 +/- 21.5bp
Average Position of motif in Background44.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GATAAATGGC-
TGATTRATGGCY
 A C G T A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C A C G T
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GATAAATGGC
GCTAAACGGT
 A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GATAAATGGC
GCTAATTGCT
 A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GATAAATGGC----
---TAATGGCGGNC
 A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GATAAATGGC
TGATTGATGA-
 A C G T A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GATAAATGGC-
-GTTAATGGCC
 A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C A C G T
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

HESX1/MA0894.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GATAAATGGC
GCTAATTGGC
 A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C
T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GATAAATGGC
-TTAAGTGGT
 A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Nobox/MA0125.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GATAAATGGC
--TAATTGGT
 A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C
A C G T A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATAAATGGC
-TTAAGTGGN
 A C T G T C G A A G C T C T G A C G T A G T C A A C G T A C T G C A T G A G T C
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T