Information for 13-GGTCTDGCGGTCCBTT (Motif 19)

A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
Reverse Opposite:
C T G A C G T A T A G C A C T G A C T G C G T A G T A C G T A C A C T G A G T C G C T A C T G A A C T G C G T A A G T C A G T C
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.823
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 26.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGTCTDGCGGTCCBTT
GGTCANNGTGACCTN-
 A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGTCTDGCGGTCCBTT
GGTCTGGCAT------
 A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGTCTDGCGGTCCBTT
AAGGTCACGGTGACCTG-
 A C G T A C G T A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G A C G T

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTDGCGGTCCBTT
AGGNCANNGTGACCT--
 A C G T A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GGTCTDGCGGTCCBTT
AGNACAGNCTGTTCTN-
 A C G T A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GGTCTDGCGGTCCBTT
-CTCTCGCGAGATCTG
 A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GGTCTDGCGGTCCBTT
GAGGTCAAAAGGTCA---
 A C G T A C G T A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCTDGCGGTCCBTT
GTTTTGCTTTCACTTTCC---
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:GGTCTDGCGGTCCBTT----
------NNGCACCTTTCTCC
 A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTDGCGGTCCBTT
AGNACANNNTGTNCTN-
 A C G T A C T G C T A G A C G T A G T C A G C T C A G T A C T G A G T C A C T G A C T G A C G T A G T C A G T C A C T G A C G T A G C T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T