Information for 1-CTTCAAAGGCCTTAGC (Motif 1)

A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
Reverse Opposite:
C T A G G A T C C A G T G C T A C G T A C T A G C T A G G T A C A G T C A C G T A G C T A C G T C T A G C T G A C T G A C T A G
p-value:1e-15
log p-value:-3.473e+01
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 15.2bp
Average Position of motif in Background78.9 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAAGGCCTTAGC
ACATCAAAGG-------
 A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAAGGCCTTAGC
ACWTCAAAGG-------
 A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAAGGCCTTAGC
CGGTTTCAAA---------
 A C G T A C G T A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTCAAAGGCCTTAGC
NATTCAAAT--------
 A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAAGGCCTTAGC
AAAGATCAAAGGAA-----
 A C G T A C G T A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAAGGCCTTAGC
ACATCAAAGGNA-----
 A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTTCAAAGGCCTTAGC
TATAGATCAAAGGAAAA---
 A C G T A C G T A C G T A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTTCAAAGGCCTTAGC
TATAGATCAAAGGAAAA---
 A C G T A C G T A C G T A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTTCAAAGGCCTTAGC
------AGGCCTNG--
 A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAAGGCCTTAGC
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A G T C A G C T A G C T A G T C C G T A C T G A C G T A C T A G A C T G A G T C A G T C A C G T C G A T G T C A C A T G A G T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T