Information for 4-TAGGGGAAAAAGTCCA (Motif 8)

G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A
Reverse Opposite:
C G A T A C T G C A T G G T C A G T A C G A C T A G C T A G C T A G C T C A G T A G T C A G T C G A T C A G T C G A C T C G T A
p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.585
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif2293.0
Percentage of Background Sequences with motif4.69%
Average Position of motif in Targets52.4 +/- 24.8bp
Average Position of motif in Background49.8 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TAGGGGAAAAAGTCCA
CANAGNNCAAAGTCCA
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TAGGGGAAAAAGTCCA
-AGAGTCCAAAGTCCA
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TAGGGGAAAAAGTCCA--
--GGGGTCAAAGTCCAAT
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TAGGGGAAAAAGTCCA----
----GGCAAAAGTCCAATAA
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAGGGGAAAAAGTCCA
---GGAACAAAGR---
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAGGGGAAAAAGTCCA
AAAGGTCAAAAGGTCA
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TAGGGGAAAAAGTCCA---
----GAAAAAATTGCAAGG
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGGGGAAAAAGTCCA-
-AAGGTCAAAAGGTCAA
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A A C G T
A C G T T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGGGGAAAAAGTCCA
-AATGGAAAAT-----
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TAGGGGAAAAAGTCCA
-------AAAAGTCAA
 G C A T C T G A C T A G C T A G T C A G T C A G G T C A T C G A C T G A T C G A C T G A A C T G C A G T G T A C T G A C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A