Information for 2-CTGGCCTTTG (Motif 6)

G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G
Reverse Opposite:
T G A C G T C A T C G A C T G A T C A G T A C G A G T C T G A C G C T A C T A G
p-value:1e-11
log p-value:-2.649e+01
Information Content per bp:1.534
Number of Target Sequences with motif214.0
Percentage of Target Sequences with motif26.82%
Number of Background Sequences with motif8328.5
Percentage of Background Sequences with motif17.03%
Average Position of motif in Targets51.4 +/- 25.5bp
Average Position of motif in Background50.4 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CTGGCCTTTG
CTGACCTTTG
 G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CTGGCCTTTG------
-TGGACTTTGNNCTCN
 G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CTGGCCTTTG-------
-TGGACTTTGNNCTNTG
 G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CTGGCCTTTG---
-TGACCTTTNCNT
 G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CTGGCCTTTG-----
-TGACCTTTGCCCTA
 G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCCTTTG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTGGCCTTTG-----
-TGACCTTTGCCCCA
 G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCCTTTG---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGGCCTTTG------
-TGACCTTTGCCCTAN
 G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGGCCTTTG-----
-TGACCTTTGACCTN
 G A T C C G A T A C T G T C A G A T G C A G T C G A C T A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C