Information for 6-TTCTAGCCAACAT (Motif 17)

C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T C G A T A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G T A
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.8 +/- 22.0bp
Average Position of motif in Background28.6 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTCTAGCCAACAT
--CGTGCCAAG--
 C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTCTAGCCAACAT
----TGCCAA---
 C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCTAGCCAACAT
TTTTCCCGCCAAAA-
 A C G T A C G T C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCTAGCCAACAT
CGTCTAGACA----
 A C G T C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCTAGCCAACAT
--BCAGACWA---
 C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTCTAGCCAACAT
TTTCCCGCCAAA--
 A C G T C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTCTAGCCAACAT
TTTCCCGCCMAV--
 A C G T C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTCTAGCCAACAT
KGTTGCTAGGMAACA-
 A C G T A C G T A C G T C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTCTAGCCAACAT
--GGTGCCAAGT-
 C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTCTAGCCAACAT-
GAAAACTAGTTAACATC
 A C G T A C G T A C G T C G A T A G C T G T A C A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C