p-value: | 1e-9 |
log p-value: | -2.292e+01 |
Information Content per bp: | 1.839 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.88% |
Number of Background Sequences with motif | 8.8 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 42.4 +/- 27.8bp |
Average Position of motif in Background | 50.5 +/- 20.9bp |
Strand Bias (log2 ratio + to - strand density) | 2.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAACACTCAAAAT AGCCACTCAAG-- |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CAACACTCAAAAT -RSCACTYRAG-- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAACACTCAAAAT AASCACTCAA--- |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAACACTCAAAAT MRSCACTYAA--- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAACACTCAAAAT -NSCACTYVAV-- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAACACTCAAAAT AAGCACTTAA--- |
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PBX1/MA0070.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CAACACTCAAAAT CCATCAATCAAA-- |
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Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAACACTCAAAAT-- -----CCAAAAATAG |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CAACACTCAAAAT-- ATAACCACTTGAAAATT |
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MEF2D/MA0773.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CAACACTCAAAAT--- ----ACTATAAATAGA |
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