Information for 3-TACTTTTTACAAG (Motif 11)

A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C T A G C G A T C G T A C G T A C G T A C G T A C G T A A C T G A C G T G T C A
p-value:1e-10
log p-value:-2.323e+01
Information Content per bp:1.839
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.2 +/- 32.4bp
Average Position of motif in Background42.3 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TACTTTTTACAAG----
-ANATTTTACGAGNNNN
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TACTTTTTACAAG-
---NTTTTACGAGN
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TACTTTTTACAAG----
-NAATTTTACGAGNTNN
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TACTTTTTACAAG-
----TTTTATKRGG
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TACTTTTTACAAG--
-TTTTTTTTCNNGTN
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACTTTTTACAAG
---NTTTTACGAC
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TACTTTTTACAAG-
----TTTTATTRGN
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXC12/MA0906.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TACTTTTTACAAG-
---NTTTTACGACC
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TACTTTTTACAAG
---NTTTTATTGG
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TACTTTTTACAAG-
---NTTTTACGACT
 A C G T G T C A A G T C C G A T C G A T C G A T A C G T A C G T C G T A G A T C G T C A C G T A A C T G A C G T
A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T