Information for 3-YRCCGCCATCTTGGCT (Motif 5)

G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
Reverse Opposite:
C T G A A T C G A T G C A G T C G T C A C G T A A C T G C G T A A C G T A C T G A T C G A G T C C T A G A C T G A G C T C T G A
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.765
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.3 +/- 20.4bp
Average Position of motif in Background54.4 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:YRCCGCCATCTTGGCT
-GCCGCCATCTTG---
 G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:YRCCGCCATCTTGGCT
-GCNGCCATCTTG---
 G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YRCCGCCATCTTGGCT-
CCNNACCATCTGGCCTN
 G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YRCCGCCATCTTGGCT
GTCCGCCATTA-----
 G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:YRCCGCCATCTTGGCT
TACCCGCATN------
 G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---YRCCGCCATCTTGGCT
TCGTACCCGCATCATT---
 A C G T A C G T A C G T G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YRCCGCCATCTTGGCT
----GCCATCTGTT--
 G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-YRCCGCCATCTTGGCT
GTACCCGCATN------
 A C G T G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YRCCGCCATCTTGGCT-
------NNACTTGCCTT
 G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----YRCCGCCATCTTGGCT
TACGCCCCGCCACTCTG---
 A C G T A C G T A C G T A C G T G A C T T C G A A G T C A G T C T A C G A T G C A G T C G T C A A C G T A G T C C G A T A C G T A C T G A T C G A T G C A G C T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T