Information for 24-GAAATCCACTAGTCAT (Motif 47)

A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T
Reverse Opposite:
C G T A A C G T A T C G C G T A A G T C A C G T C G T A A C T G A C G T A T C G C T A G C G T A C G A T A C G T A G C T A G T C
p-value:1e-4
log p-value:-1.019e+01
Information Content per bp:1.899
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 17.8bp
Average Position of motif in Background34.4 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAATCCACTAGTCAT
SSAATCCACANN----
 A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAATCCACTAGTCAT
TCCAATCCACA------
 A C G T A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAATCCACTAGTCAT-
-TAAGCCACTTGAAATT
 A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T A C G T
A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAAATCCACTAGTCAT
---ATCCAC-------
 A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAATCCACTAGTCAT-
-TAAGCCACTTAACATT
 A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T A C G T
A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:GAAATCCACTAGTCAT-
-----------GTCATN
 A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAAATCCACTAGTCAT-
GANGTTAACTAGTTTNN
 A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAAATCCACTAGTCAT-
-TAAGCCACTTGAAATT
 A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GAAATCCACTAGTCAT---
----NNAATTAGTCACGGT
 A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAAATCCACTAGTCAT
GGAAATCCCC-------
 A C G T A C T G C T G A C G T A C G T A A C G T A G T C A T G C C G T A A G T C A C G T G T C A A C T G A C G T A T G C G T C A C G A T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T