Information for 11-CWGTCGTGTKCCTKGC (Motif 19)

A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
Reverse Opposite:
T C A G A T G C G T A C C T G A T C A G C T A G T G A C G T C A A T G C C T G A A G T C T C A G G T C A A G T C G C A T A C T G
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.715
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.7 +/- 18.5bp
Average Position of motif in Background45.7 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWGTCGTGTKCCTKGC
-----CTGTTCCTGG-
 A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CWGTCGTGTKCCTKGC
NNNNTTGTGTGCTTNN-
 A C G T A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CWGTCGTGTKCCTKGC
--GTGGCGTGACNG--
 A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CWGTCGTGTKCCTKGC
GCTGTGGTTT-------
 A C G T A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CWGTCGTGTKCCTKGC
NNHTGTGGTTWN------
 A C G T A C G T A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CWGTCGTGTKCCTKGC
GTCWGCTGTYYCTCT---
 A C G T A C G T A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CWGTCGTGTKCCTKGC
CTGTGGTTTN------
 A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CWGTCGTGTKCCTKGC
GTCTGTGGTTT-------
 A C G T A C G T A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CWGTCGTGTKCCTKGC
NNGTCGCGTGNCAC--
 A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CWGTCGTGTKCCTKGC
ACTYKNATTCGTGNTACTTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C A C T G A G C T A T C G A C G T A C T G G A T C A G T C A G C T C A T G A T C G A G T C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T