Information for 6-CAGCMAWCCTGCAGVW (Motif 10)

A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T
Reverse Opposite:
C G T A A C G T A G T C A G C T A C T G T A G C C G T A C A T G A C T G G C T A A C G T A C T G A C T G A T G C A G C T A C T G
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.734
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets74.0 +/- 16.4bp
Average Position of motif in Background50.1 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGCMAWCCTGCAGVW
GCCGCCATCTTG-----
 A C G T A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGCMAWCCTGCAGVW
GCNGCCATCTTG-----
 A C G T A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGCMAWCCTGCAGVW-
--GGCCYCCTGCTGDGH
 A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CAGCMAWCCTGCAGVW-
-------CCTGCTGAGH
 A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGCMAWCCTGCAGVW
CACAGN------------
 A C G T A C G T A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGCMAWCCTGCAGVW
CAGCC-----------
 A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAGCMAWCCTGCAGVW
--SNGCACCTGCHS--
 A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CAGCMAWCCTGCAGVW
----CCCCCTGCTGTG
 A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CAGCMAWCCTGCAGVW---
----TNTCCTGCTGTGNNG
 A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CAGCMAWCCTGCAGVW---
----TCNCCTGCTGNGNNN
 A G T C C T G A A T C G G T A C G T A C T G C A C G A T A G T C G T A C A C G T A C T G A G T C C T G A A C T G T G C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G