Information for 5-TGTTAAAGAT (Motif 11)

A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T
Reverse Opposite:
C G T A A C G T G T A C C G A T A C G T C G A T G T C A T G C A G T A C C G T A
p-value:1e-10
log p-value:-2.362e+01
Information Content per bp:1.746
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif284.3
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets50.7 +/- 27.6bp
Average Position of motif in Background51.7 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTTAAAGAT---
GGTTAAACATTAA
 A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

FOXF2/MA0030.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAAAGAT--
NTTGTTTACGTTNN
 A C G T A C G T A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGTTAAAGAT----
------AGATAASR
 A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGTTAAAGAT---
-GTTAATNATTAA
 A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTTAAAGAT
GNCTATAAAAGG-
 A C G T A C G T A C G T A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGTTAAAGAT----
------AGATAAGA
 A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

HNF1B/MA0153.2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTTAAAGAT----
-GTTAATGATTAAC
 A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGTTAAAGAT--
-----AAGCTTG
 A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTTAAAGAT---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAAAGAT--
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A G T G C T A G T C A C G T A A C T G G T C A A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A