Information for 3-CATTTCAAAAGTC (Motif 5)

G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T A C G T A G C T A C G T A C T G C G T A C G T A C G T A A G C T A C T G
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 21.7bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CATTTCAAAAGTC--
------AAAAGTCAA
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATTTCAAAAGTC
CGGTTTCAAA----
 A C G T G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CATTTCAAAAGTC------
---GGCAAAAGTCCAATAA
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATTTCAAAAGTC
-ATTGCACAATA-
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATTTCAAAAGTC
-ACATCAAAGG--
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATTTCAAAAGTC
-NATTCAAAT---
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CATTTCAAAAGTC-----
--TCTCAAAGGTCACCTG
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATTTCAAAAGTC
-ACWTCAAAGG--
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATTTCAAAAGTC-
GAGGTCAAAGGTCA
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATTTCAAAAGTC
-ATTGCATAA---
 G T A C C T G A A C G T A C G T A C G T G T A C C G T A C T G A C G T A C G T A A C T G A C G T A G T C
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T