Information for 3-TTGTCCCACA (Motif 17)

A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A
Reverse Opposite:
C G A T A T C G C G A T C T A G A C T G A T C G C G T A T G A C C G T A C T G A
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.841
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif111.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets50.3 +/- 27.1bp
Average Position of motif in Background48.1 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCCCACA-----
NNAGTCCCACTCNNNN
 A C G T A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGTCCCACA
HTTTCCCASG
 A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCCACA
YCTTTGTTCC---
 A C G T A C G T A C G T A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGTCCCACA----
TTGACCTANTTATN
 A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCCACA
CCATTGTTNY---
 A C G T A C G T A C G T A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCCACA
CCATTGTTTT---
 A C G T A C G T A C G T A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTGTCCCACA
CTCATTGTC-----
 A C G T A C G T A C G T A C G T A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCCACA
CCWTTGTYYB---
 A C G T A C G T A C G T A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TTGTCCCACA-
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTGTCCCACA
-TGACCT---
 A G C T C G A T A C T G C G A T A T G C A G T C G A T C C G T A A T G C C G T A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T