Information for 7-AAGCACATACTMA (Motif 15)

C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A
Reverse Opposite:
A C G T C A G T C G T A A T C G A C G T C G T A A G C T A C T G A C G T A C T G A G T C A G C T A C G T
p-value:1e-5
log p-value:-1.260e+01
Information Content per bp:1.744
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets50.2 +/- 23.1bp
Average Position of motif in Background48.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGCACATACTMA-
AGCGGCACACACGCAA
 A C G T A C G T C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGCACATACTMA-
CGAAGCACACAAAATA
 A C G T A C G T C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGCACATACTMA
AAGGATATNTN--
 C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAGCACATACTMA
GGAAANTGAAACTNA
 A C G T A C G T C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGCACATACTMA
WAAGTAAAYA----
 A C G T C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAGCACATACTMA-
----AAGCACTTAA
 C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAGCACATACTMA
GAAACTGAAACT--
 A C G T C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAGCACATACTMA
AAACATATGTTT-
 C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAGCACATACTMA
AAACCACANN----
 A C G T C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AAGCACATACTMA
CAAAATCGAAACTAA
 A C G T A C G T C G T A C T G A C T A G T A G C C G T A A G T C C T G A G C A T G T C A A T G C A C G T G T C A C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A