Information for 3-GTCYGGGACT (Motif 14)

C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T
Reverse Opposite:
C G T A T A C G A G C T A G T C G T A C G A T C C T A G A T C G G T C A G T A C
p-value:1e-6
log p-value:-1.568e+01
Information Content per bp:1.692
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif279.9
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets48.4 +/- 23.0bp
Average Position of motif in Background46.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------GTCYGGGACT
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTCYGGGACT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCYGGGACT
CTGTCTGG----
 A C G T A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTCYGGGACT
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCYGGGACT
TTTCCAGGAAA
 A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCYGGGACT
GGTCTGGCAT-
 A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCYGGGACT-
TGTCAGGGGGCG
 A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCYGGGACT
WDNCTGGGCA-
 A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCYGGGACT---
NNNACCGAGAGTNNN
 A C G T A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCYGGGACT
CTTCCNGGAA-
 A C G T C A T G A C G T A T G C G A T C C T A G A C T G C T A G T C G A A T G C A C G T
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T