Information for 1-GTTACTTGTT (Motif 11)

A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T
Reverse Opposite:
C T G A C G T A A G T C C G T A C G T A C A T G A C G T C G T A C T G A A G T C
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.880
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif48.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets35.6 +/- 15.1bp
Average Position of motif in Background54.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTTACTTGTT----
CTATAATTGTTAGCG
 A C G T A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTTACTTGTT----
NNNTTAATTGGTTTTT
 A C G T A C G T A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GTTACTTGTT------
--TAATTGTTCTAAAC
 A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0066.1_Sox17_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTTACTTGTT---
NNATNAATTGTTTNN
 A C G T A C G T A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTACTTGTT-----
NNTTTATTGTTCTNNN
 A C G T A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GTTACTTGTT
----ATTGTT
 A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTACTTGTT-----
ANNTCTATTGTTCNNNA
 A C G T A C G T A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTTACTTGTT------
AATCAATTGTTCCGCTA
 A C G T A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTACTTGTT----
ANNTCCATTGTTCNNN
 A C G T A C G T A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTTACTTGTT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C T G A G C T A C G T G T C A G A T C A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T