Information for 2-GCAAACTCTAKGG (Motif 7)

A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
Reverse Opposite:
G T A C A G T C G T C A C G A T C T G A A T C G C G T A C T A G G A C T A G C T A C G T A C T G A G T C
p-value:1e-12
log p-value:-2.961e+01
Information Content per bp:1.757
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 24.4bp
Average Position of motif in Background43.2 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCAAACTCTAKGG
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCAAACTCTAKGG
TGCCAA--------
 A C G T A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCAAACTCTAKGG
GGTGCCAAGT------
 A C G T A C G T A C G T A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCAAACTCTAKGG
GCCATCTGTT---
 A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GCAAACTCTAKGG--
-----TTCTNMGGAA
 A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GCAAACTCTAKGG
ATGCCAACC------
 A C G T A C G T A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.47
Offset:1
Orientation:forward strand
Alignment:GCAAACTCTAKGG--
-AAAATTGTTATGAA
 A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:GCAAACTCTAKGG
-CCAGCTGTTN--
 A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--GCAAACTCTAKGG
CGACCAACTGCCGTG
 A C G T A C G T A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.46
Offset:-7
Orientation:forward strand
Alignment:-------GCAAACTCTAKGG
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C T G C A C T G A C T G A A G T C A C G T T A G C A G C T C G T A A C G T C T A G A C T G
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A