Information for 4-GVSGCTCTCTGAGGTG (Motif 5)

C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G
Reverse Opposite:
G T A C G T C A T G A C G T A C A C G T T A G C C G T A A C T G C G T A T C A G G T C A T A C G G A T C T A G C A G T C A G T C
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.653
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.0 +/- 20.9bp
Average Position of motif in Background53.1 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GVSGCTCTCTGAGGTG-
------GTCTGTGGTTT
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GVSGCTCTCTGAGGTG-
-------GCTGTGGTTT
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GVSGCTCTCTGAGGTG--
--------CTGTGGTTTN
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GVSGCTCTCTGAGGTG-
-------TTTGCGGTTT
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GVSGCTCTCTGAGGTG
-------GCTGTG---
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GVSGCTCTCTGAGGTG
--AGGTCTCTAACC--
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GVSGCTCTCTGAGGTG----
NGAGGTCANNGAGTTCANNN
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GVSGCTCTCTGAGGTG--
-AATCGCACTGCATTCCG
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GVSGCTCTCTGAGGTG
----CCTGCTGAGH--
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GVSGCTCTCTGAGGTG-
--------TTGCGGTTT
 C T A G T C A G A T C G C T A G A T G C C A G T A G T C C G A T G T A C A C G T A T C G T G C A A C T G A C T G C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T