p-value: | 1e-7 |
log p-value: | -1.627e+01 |
Information Content per bp: | 1.748 |
Number of Target Sequences with motif | 14.0 |
Percentage of Target Sequences with motif | 1.81% |
Number of Background Sequences with motif | 140.1 |
Percentage of Background Sequences with motif | 0.29% |
Average Position of motif in Targets | 52.8 +/- 25.2bp |
Average Position of motif in Background | 53.7 +/- 26.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTTACGAGG-- CCATATATGGNA |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CCTTACGAGG BNTGDCCTTG----- |
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HLTF/MA0109.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCTTACGAGG AACCTTATAT-- |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTTACGAGG-- CCTTTTATAGNC |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTTACGAGG TGACCTTGAN--- |
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PB0078.1_Srf_1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTACGAGG-- TNCCATATATGGNA |
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SA0001.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTACGAGG-------- NNCCTGNAAAAAAAAAAAAA |
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SA0002.1_at_AC_acceptor/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTACGAGG-------- NNCCTGNAAAAAAAAAAAAA |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTTACGAGG TGACCTTGAV--- |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTTACGAGG--- ANATTTTACGAGNNNN |
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