Information for 12-ACATATCTTAAAC (Motif 33)

C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A C G T A C T A G C G T A C G A T C G T A A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 16.9bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACATATCTTAAAC
GACATATGTT----
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACATATCTTAAAC
AACATATGTT----
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACATATCTTAAAC
AAACATATGTTT---
 A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACATATCTTAAAC
ANCATATGTT----
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACATATCTTAAAC
ANCATATGGT----
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACATATCTTAAAC
ACCATATGGT----
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACATATCTTAAAC
ANCATATGGT----
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACATATCTTAAAC
ACCATATGTT----
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACATATCTTAAAC-
----GTCGTAAAAA
 C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C A C G T
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACATATCTTAAAC-
----GTCGTAAAAT
 C G T A A G T C C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A G T A C A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T