Information for 5-TTAACCMYTWCAW (Motif 22)

A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G C G A T C G T A C T G A A C T G C T A G C T A G A C G T A C G T C G T A C G T A
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 22.7bp
Average Position of motif in Background38.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0130.1_Otx2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTAACCMYTWCAW
GANNATTAATCCCTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTAACCMYTWCAW
GNNNATTAATCCCTNCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A A C G T

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTAACCMYTWCAW
NNNAATTAATCCCCNCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TTAACCMYTWCAW
NNNNCTGTTAACNNTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTAACCMYTWCAW
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTAACCMYTWCAW
ATTAACACCT----
 A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTAACCMYTWCAW
NANANTTAATCCCNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TTAACCMYTWCAW
GATAATTAATCCCTCTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTAACCMYTWCAW
-TGACCTTTNCNT
 A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTAACCMYTWCAW
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C G T A C G A C T A C G T C G T A A G T C C G T A C G T A
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C