Information for 15-AAGAWACACAGAGAAS (Motif 19)

C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
Reverse Opposite:
T A C G A C G T A G C T A G T C A C G T A T G C A C G T A C T G A C G T C T A G A C G T C G T A A G C T G T A C A C G T C G A T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.750
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 17.4bp
Average Position of motif in Background54.2 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGAWACACAGAGAAS
AAACAGACAAAGGAAT-
 A C G T C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGAWACACAGAGAAS
CAAAAGTAAACAAAG---
 A C G T A C G T C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAGAWACACAGAGAAS
--GGAACAAAGR----
 C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAGAWACACAGAGAAS
-----ACAAAG-----
 C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGAWACACAGAGAAS
AAAGTAAACAAAAATT--
 A C G T A C G T C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGAWACACAGAGAAS
-AGATGKDGAGATAAG
 C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGAWACACAGAGAAS
--AAAACAAAGG----
 C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGAWACACAGAGAAS-
WNAGTCADAVTGAAACTN
 A C G T C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGAWACACAGAGAAS
BAGTCATANTGAAAG-
 C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAGAWACACAGAGAAS
--VRRACAAWGG----
 C G T A C G T A C A T G C T G A G C A T C G T A A G T C C G T A T G A C G T C A A T C G C G T A C T A G C T G A C G T A A T G C
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T