Information for 12-TYAAGGRYCYGTYTCY (Motif 15)

A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A C T G A C G T A G T A C C T G A A T C G C T G A A G T C A G T C A G T C A C G T A C G T C T G A C T G A
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 25.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TYAAGGRYCYGTYTCY
NTCAAGGTCA-------
 A C G T A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TYAAGGRYCYGTYTCY
-TCAGTTTCATTTTCC
 A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C
A C G T C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

IRF8/MA0652.1/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TYAAGGRYCYGTYTCY-
---AGTTTCGGTTTCGN
 A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TYAAGGRYCYGTYTCY
---AGTTTCAGTTTC-
 A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C
A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TYAAGGRYCYGTYTCY
-NRRGGGTCTT-----
 A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TYAAGGRYCYGTYTCY
-CAAGGHCANV-----
 A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:TYAAGGRYCYGTYTCY--
--AAGCACCTGTCAATAT
 A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C A C G T A C G T
A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:forward strand
Alignment:TYAAGGRYCYGTYTCY
--------CTGTTTAC
 A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TYAAGGRYCYGTYTCY
BTCAAGGTCA-------
 A C G T A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TYAAGGRYCYGTYTCY------
-----NTNNCGTATCCAAGTNN
 A G C T A G C T C G T A C G T A A C T G A C T G C T A G A G C T A T G C G A C T A C T G A C G T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G