Information for 2-AGWGATGGGGGCA (Motif 7)

T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A
Reverse Opposite:
G A C T A T C G A T G C G A T C G T A C G T A C G T A C G T C A G A C T A G T C G C T A A T G C A G C T
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.694
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif38.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets53.8 +/- 23.8bp
Average Position of motif in Background46.0 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGWGATGGGGGCA
CAAGATGGCGGC-
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGWGATGGGGGCA
---TATGCGGGTA
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGWGATGGGGGCA
CAAGATGGCGGC-
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGWGATGGGGGCA---
NNNNATGCGGGTNNNN
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGWGATGGGGGCA-
-----TNNGGGCAG
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGWGATGGGGGCA
AACAGATGGT----
 A C G T T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGWGATGGGGGCA
--TAATGGCGGNC
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGWGATGGGGGCA-----
-NTNNNGGGGTCANGNNN
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGWGATGGGGGCA--
AAAGATGATGTCATC
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGWGATGGGGGCA-
---CATGCGGGTAC
 T C G A T A C G C G A T C T A G C T G A A C G T A C T G C A T G C A T G C T A G T A C G A T G C C G T A A C G T
A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C