Information for 1-AGAATTTGGGCCDAGG (Motif 2)

G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G
Reverse Opposite:
T A G C A T G C A G C T G A C T A T C G A T C G G T A C G T A C A T G C C G T A C T G A C G T A A G C T A G C T G T A C C A G T
p-value:1e-15
log p-value:-3.677e+01
Information Content per bp:1.709
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.2 +/- 28.1bp
Average Position of motif in Background46.4 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGAATTTGGGCCDAGG----
----NNAGGGACAAGGGCNC
 G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGAATTTGGGCCDAGG---
--NNTNNGGGGCGGNGNGN
 G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGAATTTGGGCCDAGG
ACAGGATGTGGT------
 A C G T A C G T G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGAATTTGGGCCDAGG
---AAYTAGGTCA---
 G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:AGAATTTGGGCCDAGG---
-------AGGTCAAGGTCA
 G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGAATTTGGGCCDAGG
TATAAGTAGGTCAA--
 G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGAATTTGGGCCDAGG
TGCGCATAGGGGAGGAG-
 A C G T A C G T G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AGAATTTGGGCCDAGG---
-------AGGTCAAGGTCA
 G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:forward strand
Alignment:AGAATTTGGGCCDAGG
-------AGGCCTAG-
 G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AGAATTTGGGCCDAGG---
-----TAGGGCAAAGGTCA
 G T C A A C T G C T G A T C G A C G A T G A C T A C G T A T C G A C T G A C T G T A G C A T G C C T G A C T G A A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A