Information for 5-CCAGGAGGCA (Motif 15)

A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A
Reverse Opposite:
A G C T T A C G A T G C T A G C A C G T G T A C A G T C A C G T A C T G A T C G
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.825
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.48%
Number of Background Sequences with motif697.1
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets53.5 +/- 26.3bp
Average Position of motif in Background50.2 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGAGGCA
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGGCA
ANCAGGATGT-
 A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCAGGAGGCA-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCAGGAGGCA-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCAGGAGGCA
TGCCCCAGGGCA
 A C G T A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCAGGAGGCA------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAGGCA-
CACAGCAGGGGG
 A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCAGGAGGCA
TGCCCCAGGGCA
 A C G T A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAGGAGGCA
TGCCCCCGGGCA
 A C G T A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CCAGGAGGCA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A C T A G C A T G C G T A A C T G A T C G A T G C C T G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T