Information for 6-GAGCTCTACACGA (Motif 9)

C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A C T G C G A T C G T A A C T G C G T A C T A G A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 35.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCTCTACACGA
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GAGCTCTACACGA-
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTCTACACGA
BCNGGTTCTAGANCN
 A C G T A C G T C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAGCTCTACACGA--
-NGCTTTCTAGGAAN
 C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A A C G T A C G T
A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GAGCTCTACACGA-
NNGCNCTGCGCGGC
 C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GAGCTCTACACGA
--TGTCTAGACG-
 C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A
A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTCTACACGA---
TGACCTTTGCATGACCT
 A C G T C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A A C G T A C G T A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GAGCTCTACACGA---
NNTTTGCACACGGCCC
 C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTCTACACGA---
TGACCTTTANTTGACCT
 A C G T C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A A C G T A C G T A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:GAGCTCTACACGA-----
-ANTTNTACATGTANTTN
 C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T