Information for 3-GTCATRAATGTGT (Motif 4)

T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
Reverse Opposite:
T C G A G T A C G C T A A T G C C G T A A C G T C G A T G A C T G T C A C G A T A T C G G T C A A T G C
p-value:1e-17
log p-value:-4.095e+01
Information Content per bp:1.673
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif163.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets49.1 +/- 26.5bp
Average Position of motif in Background47.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTCATRAATGTGT
NNTNTCATGAATGT--
 A C G T A C G T A C G T T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCATRAATGTGT--
NTTNTATGAATGTGNNC
 A C G T A C G T T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCATRAATGTGT
--NTGGAATGTN-
 T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCATRAATGTGT
--NTGGAATGTG-
 T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCATRAATGTGT
GGAGGTCATTAATTAT-
 A C G T A C G T A C G T A C G T T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCATRAATGTGT
-CCWGGAATGY--
 T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTCATRAATGTGT
-TGATTRATGGCY
 T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PH0150.1_Pou4f3/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCATRAATGTGT
GACNTCATTAATAANN
 A C G T A C G T A C G T T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCATRAATGTGT
GGTCGTAAAATT--
 A C G T T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCATRAATGTGT
---TGGAATGT--
 T A C G A C G T T A G C C G T A C A G T C T G A G C T A G T C A G C A T A T C G C A G T A C T G A C G T
A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T