Information for 11-GAAGTGATTA (Motif 20)

A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A
Reverse Opposite:
A C G T C G T A T G C A A G C T A T G C C G T A A G T C A C G T A G C T A T G C
p-value:1e-9
log p-value:-2.154e+01
Information Content per bp:1.766
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif22.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.9 +/- 30.6bp
Average Position of motif in Background49.1 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAAGTGATTA
NTCAAGTGGN--
 A C G T A C G T A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GAAGTGATTA-
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAAGTGATTA
TTRAGTGSYK-
 A C G T A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GAAGTGATTA
NTCAAGTGG---
 A C G T A C G T A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGTGATTA--
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAAGTGATTA--
--AGTAATTAAC
 A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A A C G T A C G T
A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GAAGTGATTA
TAATTGATTA
 A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

EVX1/MA0887.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAGTGATTA--
--GGTAATTAGC
 A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A A C G T A C G T
A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

EVX2/MA0888.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAGTGATTA--
--GGTAATTAGC
 A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

PH0028.1_En1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAAGTGATTA----
GCGAACTAATTAATGC
 A C G T A C G T A T C G C T G A G T C A A C T G C G A T T A C G C T G A A C G T G C A T C G T A A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C