p-value: | 1e-6 |
log p-value: | -1.452e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.42% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 34.3 +/- 25.6bp |
Average Position of motif in Background | 47.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCATCTTTGGCTGGGT NGTCACGCTTGGCTGC-- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCATCTTTGGCTGGGT GTCATGCHTGRCTGS-- |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCATCTTTGGCTGGGT ---TGATTGGCTANN- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TCATCTTTGGCTGGGT ------TWGTCTGV-- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TCATCTTTGGCTGGGT ------TTGGCA---- |
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PB0167.1_Sox13_2/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCATCTTTGGCTGGGT---- ---GTATTGGGTGGGTAATT |
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NFIX/MA0671.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TCATCTTTGGCTGGGT -----NTTGGCANN-- |
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PB0141.1_Isgf3g_2/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCATCTTTGGCTGGGT NNGTANTGTTTTNC----- |
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PH0026.1_Duxbl/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCATCTTTGGCTGGGT-- -NNNNGTTGATTGGGTCG |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TCATCTTTGGCTGGGT- -------WDNCTGGGCA |
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