Information for 8-ATATAAWATTATTRTR (Motif 13)

C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G
Reverse Opposite:
A G T C T C G A A G C T C G T A G C T A G A C T G T C A C G T A A G C T G C A T G C A T A G C T G T C A G C A T C G T A A G C T
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.605
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif332.3
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets45.5 +/- 24.9bp
Average Position of motif in Background49.1 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ATATAAWATTATTRTR---
---TATAATTATAATATTC
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:ATATAAWATTATTRTR
------AATTATT---
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATATAAWATTATTRTR---
---GCTAATTATAATTATC
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATATAAWATTATTRTR---
---TTTAATTATAATTAAG
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATATAAWATTATTRTR---
---TAAGATTATAATACGG
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Arid3b/MA0601.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ATATAAWATTATTRTR
----NTAATTAATAT-
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATATAAWATTATTRTR-
-TACTTAATTAATNNAN
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G A C G T
A C G T G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

PH0023.1_Dlx4/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATATAAWATTATTRTR-
GTCGGTAATTATNGNGN
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATATAAWATTATTRTR-
NNNGGTAATTATNGNGN
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATATAAWATTATTRTR--
----AAAATTGTTATGAA
 C T G A G C A T C G T A C A G T T C G A C G T A C G T A C T G A C G A T A C G T C T G A C G A T C G A T T C G A A G C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A