Information for 5-AAAAAAAMAAAAMAAM (Motif 21)

G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
Reverse Opposite:
A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A G C T C A G T
p-value:1e-4
log p-value:-9.539e+00
Information Content per bp:1.482
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif52.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets61.5 +/- 23.7bp
Average Position of motif in Background46.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAMAAAAMAAM
GTTAAAAAAAAAAATTA--
 A C G T A C G T A C G T G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAMAAAAMAAM
AACAAACAACAAGAG---
 A C G T A C G T G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAMAAAAMAAM
-NANANAC--------
 G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAMAAAAMAAM
ATATCAAAACAAAACA--
 A C G T A C G T G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAMAAAAMAAM
GTTCAAAAAAAAAATTC---
 A C G T A C G T A C G T A C G T G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAMAAAAMAAM
TACTGGAAAAAAAA------
 A C G T A C G T A C G T A C G T G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAMAAAAMAAM
AAACAAACATTC----
 G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAMAAAAMAAM
CAAAAGTAAACAAAG----
 A C G T A C G T A C G T G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAAAAAMAAAAMAAM
CAAACAACAACACCT-
 G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAMAAAAMAAM
AACACCAAAACAAAGGA--
 A C G T A C G T A C G T G T C A T C G A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T G C A T C G A T G C A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T