Information for 6-TMAGTGACYCCAG (Motif 6)

A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G C A T G C T G A C T A G A C G T A G T C C G T A G A T C A G C T C A G T C G T A
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.757
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 25.2bp
Average Position of motif in Background51.5 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TMAGTGACYCCAG
TTAAGTGGN-----
 A C G T A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TMAGTGACYCCAG
TTAAGTGC------
 A C G T A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TMAGTGACYCCAG---
NNANTTGACCCCTNNNN
 A C G T A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TMAGTGACYCCAG
TTAAGTGGT-----
 A C G T A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TMAGTGACYCCAG---
TGTCGTGACCCCTTAAT
 A C G T A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TMAGTGACYCCAG
TTAAGTGCTT----
 A C G T A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TMAGTGACYCCAG--
---ATGACGTCAYYN
 A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TMAGTGACYCCAG
-NCGTGACN----
 A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TMAGTGACYCCAG---
NNCNTGACCCCGCTCT
 A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TMAGTGACYCCAG---
NNNNTGACCCGGCGCG
 A C G T G T C A C T G A C A T G A C G T A C T G G T C A A G T C G A C T G A T C G T A C C T G A A C T G A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G