Information for 13-CGCGCATGCG (Motif 20)

A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G
Reverse Opposite:
A G T C C T A G A T G C T C G A G A C T A C T G A T G C C T A G A G T C T C A G
p-value:1e-6
log p-value:-1.438e+01
Information Content per bp:1.685
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif158.3
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets54.8 +/- 25.0bp
Average Position of motif in Background48.5 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CGCGCATGCG-
GTGCGCATGCGC
 A C G T A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CGCGCATGCG-
TGCGCAGGCGC
 A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CGCGCATGCG-
CTGCGCATGCGC
 A C G T A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CGCGCATGCG-
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A C G T A C G T A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCATGCG
TACCCGCATN--
 A C G T A C G T A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGCGCATGCG
ACGCCCACGCA
 A C G T A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCATGCG
GTACCCGCATN--
 A C G T A C G T A C G T A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCGCATGCG--
--GGCACGCGTC
 A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G A C G T A C G T
A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCGCATGCG
CACGCA----
 A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGCGCATGCG-
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A G T C T C A G G A T C T A C G A G T C C T G A A G C T T A C G G A T C T A C G A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T