Information for 4-AGSTGGTGAMARAATC (Motif 5)

C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C
Reverse Opposite:
C T A G C T G A A C G T A C G T A G C T A C G T A C T G A C G T A G T C C G T A A T G C G T A C G T C A A T G C A G T C A C G T
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.754
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 19.9bp
Average Position of motif in Background84.7 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC
-GGTGYTGACAGS---
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC
-----GTCATAAAAN-
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C
A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC-
-AAAGGTAATAAAATTT
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C A C G T
A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC
--TACTGGAAAAAAAA
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C
A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC---
--GTTAAAAAAAAAAATTA
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PH0012.1_Cdx1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC-
-TAAGGTAATAAAATTA
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C A C G T
A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC----
-----CTCACACAATGGCGC
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC--
--TAGGTAATAAAATTCA
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C A C G T A C G T
A C G T A C G T C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC
----GGTAATAAAAA-
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C
A C G T A C G T A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGSTGGTGAMARAATC---
--AATGCAATAAAATTTAT
 C G T A C T A G A T C G C A G T A C T G A T C G C G A T T A C G C G T A G T A C C G T A T C G A C G T A C G T A A G C T G A T C A C G T A C G T A C G T
A C G T A C G T T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T