Information for 12-CTGAAAGGTGAGT (Motif 14)

A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T
Reverse Opposite:
G T C A A T G C A C G T A G T C C G T A A G T C A G T C A G C T A C G T A C G T A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 21.3bp
Average Position of motif in Background36.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CTGAAAGGTGAGT--
----CAGGTAAGTAT
 A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGAAAGGTGAGT
ANGNAAAGGTCA--
 A C G T A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGAAAGGTGAGT--
TCTCAAAGGTCACGAG
 A C G T A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGAAAGGTGAGT
----CAGGTGAGG
 A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGAAAGGTGAGT--
TCTCAAAGGTCACCTG
 A C G T A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAAGGTGAGT
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAAGGTGAGT
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAAGGTGAGT
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAAGGTGAGT
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTGAAAGGTGAGT
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T C A C T G A A C T G A C T G A C G T A C T G C G T A A T C G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T