Information for 8-CTAGCWAANG (Motif 10)

A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G
Reverse Opposite:
A G T C A C T G G A C T A G C T C G T A A T C G A G T C C A G T G T C A T A C G
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.665
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif281.2
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets44.1 +/- 25.6bp
Average Position of motif in Background50.6 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTAGCWAANG
-CAGCC----
 A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTAGCWAANG--
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTAGCWAANG---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAGCWAANG-
ACTAGCCAATCA
 A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAGCWAANG
ACTAGTTAAC-
 A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTAGCWAANG-
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------CTAGCWAANG-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTAGCWAANG-
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTAGCWAANG-
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTAGCWAANG
SCCTAGCAACAG
 A C G T A C G T A G T C C A G T G T C A T C A G A T G C G C A T T C G A C T G A T G A C T C A G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G