Information for 10-TTTAATGAGC (Motif 8)

C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C
Reverse Opposite:
C T A G T G A C G A C T T G A C G C T A G C A T A C G T C G T A G C T A G T C A
p-value:1e-14
log p-value:-3.401e+01
Information Content per bp:1.670
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif9.67%
Number of Background Sequences with motif1648.3
Percentage of Background Sequences with motif3.46%
Average Position of motif in Targets44.5 +/- 26.6bp
Average Position of motif in Background49.4 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TTTAATGAGC-
-NTAATGAGCT
 C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C A C G T
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TTTAATGAGC----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTAATGAGC---
NAATTTTACGAGNTNN
 A C G T A C G T A C G T C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTAATGAGC
NTTTTACGAGN
 A C G T C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTAATGAGC
TTTAATTGCN
 C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTAATGAGC
TTTTATTRGN
 C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTAATGAGC
TTTAAT----
 C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTAATGAGC
NTTAATTAGN
 C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C
C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTTAATGAGC
-TTAATTAN-
 C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C
A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTTAATGAGC
-TTAATTAG-
 C A G T C G A T G C A T T G C A C G T A C G A T A C T G C T G A A C T G G A T C
A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T