Information for 4-CTGTCCAARGTGCTGA (Motif 13)

A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G T A G C C G T A A G T C A G T C G A C T C G A T A C T G A C T G T C G A T G A C C G T A C T A G
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.794
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.6 +/- 22.7bp
Average Position of motif in Background58.8 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCCAARGTGCTGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----CTGTCCAARGTGCTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTCCAARGTGCTGA
-TGCCCTNAGGGCA--
 A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGTCCAARGTGCTGA
-TGCCCTGAGGGCA--
 A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGTCCAARGTGCTGA
-TGCCCTGAGGGCA--
 A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGTCCAARGTGCTGA-
------AATTTGCTGAC
 A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTGTCCAARGTGCTGA--
------AAAATGCTGACT
 A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTGTCCAARGTGCTGA-----
------AAANTGCTGACTNAG
 A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTGTCCAARGTGCTGA
CANAGNNCAAAGTCCA--
 A C G T A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTGTCCAARGTGCTGA------
-----AAATTTGCTGACTTAGA
 A G T C A C G T A C T G A G C T A G T C A G T C C G T A C G T A T C A G A C T G A C G T A C T G A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C