Information for 3-GKAGCATGCTGGG (Motif 7)

A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C T G A G T C G T C A A C G T A C T G A G T C A G C T G T C A A G T C
p-value:1e-11
log p-value:-2.533e+01
Information Content per bp:1.902
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 23.6bp
Average Position of motif in Background60.9 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GKAGCATGCTGGG----
--RGSMTBCTGGGAAAT
 A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GKAGCATGCTGGG---
-TCNCCTGCTGNGNNN
 A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GKAGCATGCTGGG---
-NNTCCTGCTGTGNNN
 A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GKAGCATGCTGGG-
----CCTGCTGAGH
 A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GKAGCATGCTGGG---
-TNTCCTGCTGTGNNG
 A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GKAGCATGCTGGG-
GGCCYCCTGCTGDGH
 A C G T A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GKAGCATGCTGGG
-CCCCCTGCTGTG
 A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GKAGCATGCTGGG--
CAATGCATTGTGGGTA
 A C G T A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GKAGCATGCTGGG--
-----WDNCTGGGCA
 A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GKAGCATGCTGGG----------
---GCATTCTGGGAATTGTAGTT
 A C T G A C G T C T G A A C T G A G T C G T C A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T