Information for 2-TGGSRGCRWWSGCTGC (Motif 3)

A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G A G T C A T G C C G T A C G A T A G C T A C T G G T A C G A C T T A C G A G T C A T G C C G T A
p-value:1e-13
log p-value:-3.058e+01
Information Content per bp:1.835
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.3 +/- 21.0bp
Average Position of motif in Background49.4 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGSRGCRWWSGCTGC-----
-GGYAGCAYDTGCTDCCCNNN
 A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:TGGSRGCRWWSGCTGC
----------NGCTN-
 A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TGGSRGCRWWSGCTGC
--------TWGTCTGV
 A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.49
Offset:11
Orientation:forward strand
Alignment:TGGSRGCRWWSGCTGC-
-----------GCTGTG
 A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TGGSRGCRWWSGCTGC
NNNNTTGGCGCCGANNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.49
Offset:11
Orientation:forward strand
Alignment:TGGSRGCRWWSGCTGC-
-----------GCTTCC
 A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TGGSRGCRWWSGCTGC
NNNNTTGGCGCCGANNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----TGGSRGCRWWSGCTGC
CAAGATGGCGGC---------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TGGSRGCRWWSGCTGC
TTGGCA-----------
 A C G T A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TGGSRGCRWWSGCTGC
AAGGKGRCGCAGGCA--
 A C G T A C G T A T C G A C T G A T C G C T G A A C T G G T A C T C G A C G T A C G A T A T C G A C T G A G T C A C G T A C T G A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T