p-value: | 1e-8 |
log p-value: | -1.867e+01 |
Information Content per bp: | 1.661 |
Number of Target Sequences with motif | 35.0 |
Percentage of Target Sequences with motif | 3.98% |
Number of Background Sequences with motif | 610.8 |
Percentage of Background Sequences with motif | 1.28% |
Average Position of motif in Targets | 48.6 +/- 29.0bp |
Average Position of motif in Background | 49.0 +/- 28.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 1 |
Score: | 0.93 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTGCTATGG-- NNCGTTGCTATGGNN |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 2 |
Score: | 0.89 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GTTGCTATGG------ NTNNNNNGTTGCTANGGNNCANA |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 3 |
Score: | 0.89 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTGCTATGG-- NCCGTTGCTANGNGN |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.87 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTTGCTATGG CTGTTGCTAGGS |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 5 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTTGCTATGG---- GTTGCCATGGNAAC |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 6 |
Score: | 0.79 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTATGG--- NGTTGCCATGGCAA |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 7 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTATGG--- GGTTGCCATGGCAA |
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RFX5/MA0510.2/Jaspar
Match Rank: | 8 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTATGG----- CGTTGCCATGGCAACG |
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RFX2/MA0600.2/Jaspar
Match Rank: | 9 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTATGG----- CGTTGCCATGGCAACG |
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RFX3/MA0798.1/Jaspar
Match Rank: | 10 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTTGCTATGG----- CGTTGCCATGGCAACN |
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