Information for 1-ATTGGBAATATTATTA (Motif 1)

C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
Reverse Opposite:
A G C T C G T A C G T A A C G T G T C A C G T A A C G T G T C A A C G T A G C T T A G C A G T C G T A C G C T A G T C A A C G T
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.790
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.5 +/- 25.2bp
Average Position of motif in Background44.1 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATTGGBAATATTATTA
----GTAATCDGATTA
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATTGGBAATATTATTA
----NTAATBNAATTA
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ATTGGBAATATTATTA-
-----TAATYNRATTAR
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATTGGBAATATTATTA
NNTNNCAATATTAG--
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATTGGBAATATTATTA
NNTNNCAATATTAG--
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ATTGGBAATATTATTA
-----TAATTTAATTA
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATTGGBAATATTATTA
-----TAATTTAATTA
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATTGGBAATATTATTA
-----TAATTAAATTA
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATTGGBAATATTATTA-
-TAGGTAATAAAATTCA
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A A C G T
A C G T C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:ATTGGBAATATTATTA
--------AATTATT-
 C G T A A C G T C G A T A C T G A C T G A C T G C T G A C G T A A C G T C G T A C G A T C A G T C G T A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T