Information for 16-CTCTAATGGA (Motif 23)

A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A C G A T A C G T C T G A A C T G C G T A C T A G
p-value:1e-4
log p-value:-1.099e+01
Information Content per bp:1.923
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif30.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets70.5 +/- 24.3bp
Average Position of motif in Background53.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CTCTAATGGA
--CTAATKGV
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

BARX1/MA0875.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTCTAATGGA
--NTAATTGN
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTCTAATGGA-
--CTAATCGNT
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A A C G T
A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCTAATGGA----
CCTTAATNGNTTTT
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

HOXA5/MA0158.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCTAATGGA
CACTAATT--
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCTAATGGA-
AGNGTTCTAATGANN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCTAATGGA
-GKTAATGR-
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCTAATGGA
--NTAATTGG
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCTAATGGA--
--NTAATKGTTT
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCTAATGGA-
-NNTAATTANN
 A G T C A C G T A G T C A G C T C G T A C G T A A C G T A C T G A C T G C G T A A C G T
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T