Information for 14-WGAGKCAAWAAMA (Motif 18)

C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T C G A T A C G T A C G T A T C G G T C A A G T C A C G T A G T C G C A T
p-value:1e-9
log p-value:-2.138e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 23.1bp
Average Position of motif in Background38.0 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:WGAGKCAAWAAMA-----
-AATGCAATAAAATTTAT
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WGAGKCAAWAAMA---
AAAGGTAATAAAATTT
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:WGAGKCAAWAAMA
TGAGTCA------
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WGAGKCAAWAAMA----
-AGAGCCATAAAATTCG
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:WGAGKCAAWAAMA
--AAGCCATAAAA
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A
A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WGAGKCAAWAAMA----
-CTACCAATAAAATTCT
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--WGAGKCAAWAAMA-----
AADGAGVCANYASTACAGNC
 A C G T A C G T C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WGAGKCAAWAAMA----
-TAGGTAATAAAATTCA
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WGAGKCAAWAAMA----
-AACCCAATAAAATTCG
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:WGAGKCAAWAAMA-
----CCAATAAAAC
 C G T A A C T G C G T A C T A G A C G T A T G C C G T A C G T A C G T A C G T A C G T A G T A C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C